R6 Ballot (3rd Draft) FHIR Release 3 (STU)
Publish-box (todo)

This page is part of the FHIR Specification (v3.0.2: STU 3). The current version which supercedes this version is 5.0.0 . For a full list of available versions, see the Directory of published versions . Page versions: R5 R4B R4 R3

Example MolecularDefinition/example-variation-pgx-var-1014 (Turtle)

Practitioner-example-f006-rvdb.ttl

Clinical Genomics Patient Administration Work Group Maturity Level : N/A Standards Ballot Status : Informative Compartments : No defined compartments Practitioner
Narrative XML JSON TTL

Raw Turtle , JSON-LD (+ also see Turtle/RDF Format Specification )

Example of Variation of Pgx-var-1014 Fictive Pharmacist

@prefix fhir: <http://hl7.org/fhir/> .
@prefix loinc: <https://loinc.org/rdf/> .

@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .

@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

<http://hl7.org/fhir/MolecularDefinition/example-variation-pgx-var-1014> a fhir:MolecularDefinition ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "example-variation-pgx-var-1014"] ; # 
  fhir:moleculeType [
     fhir:coding ( [
       fhir:system [ fhir:v "http://hl7.org/fhir/sequence-type"^^xsd:anyURI ] ;
       fhir:code [ fhir:v "dna" ] ;
       fhir:display [ fhir:v "DNA Sequence" ]
     ] )
  ] ; # 
  fhir:location ( [
     fhir:sequenceLocation [
       fhir:sequenceContext [
         fhir:link <http://hl7.org/fhir/MolecularDefinition/example-sequence-nc00001010-url> ;
         fhir:reference [ fhir:v "MolecularDefinition/example-sequence-nc00001010-url" ] ;
         fhir:type [ fhir:v "MolecularDefinition"^^xsd:anyURI ] ;
         fhir:display [ fhir:v "Starting Sequence Resource: Homo sapiens chromosome 10, GRCh37.p13 Primary Assembly, NC_000010.10" ]
       ] ;
       fhir:coordinateInterval [
         fhir:coordinateSystem [
           fhir:system [
             fhir:coding ( [
               a loinc:LA30102-0 ;
               fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ;
               fhir:code [ fhir:v "LA30102-0" ] ;
               fhir:display [ fhir:v "1-based character counting" ]
             ] ) ;
             fhir:text [ fhir:v "1-based character counting" ]
           ]
         ] ;
         fhir:start [
           a fhir:Quantity ;
           fhir:value [ fhir:v "96535210"^^xsd:decimal ]
         ] ;
         fhir:end [
           a fhir:Quantity ;
           fhir:value [ fhir:v "96535210"^^xsd:decimal ]
         ]
       ]
     ]
  ] ) ; # 
  fhir:representation ( [
     fhir:focus [
       fhir:coding ( [
         fhir:code [ fhir:v "reference-state" ] ;
         fhir:display [ fhir:v "Reference State" ]
       ] )
     ] ;
     fhir:literal [
       fhir:value [ fhir:v "G" ]
     ]
  ] [
     fhir:focus [
       fhir:coding ( [
         fhir:code [ fhir:v "alternative-state" ] ;
         fhir:display [ fhir:v "Alternative State" ]
       ] )
     ] ;
     fhir:literal [
       fhir:value [ fhir:v "G" ]

<http://hl7.org/fhir/Practitioner/f006> a fhir:Practitioner;
  fhir:nodeRole fhir:treeRoot;
  fhir:Resource.id [ fhir:value "f006"];
  fhir:DomainResource.text [
     fhir:Narrative.status [ fhir:value "generated" ];
     fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: f006</p><p><b>identifier</b>: 937223645 (OFFICIAL), 134IDY41W988 (USUAL)</p><p><b>name</b>: Rob van den Berk (OFFICIAL)</p><p><b>telecom</b>: ph: 0205569288(WORK), R.A.vandenberk@bmc.nl(WORK), fax: 0205664987(WORK)</p><p><b>address</b>: Galapagosweg 91 Den Burg 9105 PZ NLD (WORK)</p><p><b>gender</b>: male</p><p><b>birthDate</b>: 07/12/1975</p></div>"
  ];
  fhir:Practitioner.identifier [
     fhir:index 0;
     fhir:Identifier.use [ fhir:value "official" ];
     fhir:Identifier.system [ fhir:value "urn:oid:2.16.528.1.1007.3.1" ];
     fhir:Identifier.value [ fhir:value "937223645" ]
  ], [
     fhir:index 1;
     fhir:Identifier.use [ fhir:value "usual" ];
     fhir:Identifier.system [ fhir:value "urn:oid:2.16.840.1.113883.2.4.6.3" ];
     fhir:Identifier.value [ fhir:value "134IDY41W988" ]
  ];
  fhir:Practitioner.name [
     fhir:index 0;
     fhir:HumanName.use [ fhir:value "official" ];
     fhir:HumanName.family [ fhir:value "van den Berk" ];
     fhir:HumanName.given [
       fhir:value "Rob";
       fhir:index 0
     ];
     fhir:HumanName.suffix [
       fhir:value "MD";
       fhir:index 0

     ]
  ] ) . # 

  ];
  fhir:Practitioner.telecom [
     fhir:index 0;
     fhir:ContactPoint.system [ fhir:value "phone" ];
     fhir:ContactPoint.value [ fhir:value "0205569288" ];
     fhir:ContactPoint.use [ fhir:value "work" ]
  ], [
     fhir:index 1;
     fhir:ContactPoint.system [ fhir:value "email" ];
     fhir:ContactPoint.value [ fhir:value "R.A.vandenberk@bmc.nl" ];
     fhir:ContactPoint.use [ fhir:value "work" ]
  ], [
     fhir:index 2;
     fhir:ContactPoint.system [ fhir:value "fax" ];
     fhir:ContactPoint.value [ fhir:value "0205664987" ];
     fhir:ContactPoint.use [ fhir:value "work" ]
  ];
  fhir:Practitioner.address [
     fhir:index 0;
     fhir:Address.use [ fhir:value "work" ];
     fhir:Address.line [
       fhir:value "Galapagosweg 91";
       fhir:index 0
     ];
     fhir:Address.city [ fhir:value "Den Burg" ];
     fhir:Address.postalCode [ fhir:value "9105 PZ" ];
     fhir:Address.country [ fhir:value "NLD" ]
  ];
  fhir:Practitioner.gender [ fhir:value "male"];
  fhir:Practitioner.birthDate [ fhir:value "1975-12-07"^^xsd:date] .


<http://hl7.org/fhir/MolecularDefinition/example-sequence-nc00001010-url> a fhir:MolecularDefinition .

# - ontology header ------------------------------------------------------------

<http://hl7.org/fhir/Practitioner/f006.ttl> a owl:Ontology;
  owl:imports fhir:fhir.ttl;
  owl:versionIRI <http://hl7.org/fhir/STU3/Practitioner/f006.ttl> .


# -------------------------------------------------------------------------------------


Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.