Release 4 5

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Provenance-example-biocompute-object.xml

Example Provenance/example-biocompute-object (XML)

Security Work Group Maturity Level : N/A Standards Status : Informative Compartments : Device , Patient , Practitioner , RelatedPerson

Raw XML ( canonical form + also see XML Format Specification )

Jump past Narrative

Provenance example for MolecularSequence recorded by a Biocompute objects (id = "example-biocompute-object") 

<?xml version="1.0" encoding="UTF-8"?>


  
  
    
    
      
        
      
        
        
      
        
        
        : antiviral resistance detection (Details: [not stated] code null = 'null', stated as
         'antiviral resistance detection')
      
      
        
          
          
            
          
          
            
          
        
        
          
          Author (Details: http://hl7.org/fhir/provenance-participant-role code author = 'Author',
             stated as 'null')
          
            
          
        
      
      
      
        
          
          
            
          
          
            
          
        
        
          
          
          
            
          
        
      
    
  
  
    
  
  
    
  
  
  
    
  

  
    
      
        
        
      
    
    
      
    
  

  
    
    
      
        <!--      <reference value="https://hive.biochemistry.gwu.edu/cgi-bin/prd/htscsrs/servlet.cgi?pageid=bcoe
        xample_1"/>  todo: this is not legal; fix once definition is fixed   -->
        
          
            
            
            
          
        
        
      
    
  

<Provenance xmlns="http://hl7.org/fhir">
  <id value="example-biocompute-object"/> 
  <text> 
    <status value="generated"/> 
    <div xmlns="http://www.w3.org/1999/xhtml">
      <p> 
        <b> Generated Narrative with Details</b> 
      </p> <p> 
        <b> id</b> : example-biocompute-object</p> <p> 
        <b> target</b> : <a href="sequence-example.html">MolecularSequence/example</a> 
      </p> <p> 
        <b> period</b> : 2017-6-6 --&gt; (ongoing)</p> <p> 
        <b> recorded</b> : 2016-6-9 8:12:14</p> <p> 
        <b> reason</b> : antiviral resistance detection (Details: [not stated] code null = 'null', stated
         as
         'antiviral resistance detection')</p> 
      <h3> Agents</h3>       <table>         <tr>           <td> -</td>           <td>             <b> Role</b>           </td>           <td>             <b> Who</b>           </td>         </tr>         <tr>           <td> *</td>           <td> Author (Details: http://hl7.org/fhir/provenance-participant-role code author =

             'Author',
             stated as 'null')</td> 
          <td>             <a href="practitioner-example.html">Practitioner/example</a>           </td>         </tr>       </table>       <h3> Entities</h3>       <table>         <tr>           <td> -</td>           <td>             <b> Role</b>           </td>           <td>             <b> Reference</b>           </td>         </tr>         <tr>           <td> *</td>           <td> source</td>           <td>             <a href="https://hive.biochemistry.gwu.edu/cgi-bin/prd/htscsrs/servlet.cgi?pageid=bcoexample_1">Biocompute example</a>           </td>         </tr>       </table>     </div>   </text>   <target>     <reference value="MolecularSequence/example/_history/1"/>   </target>   <occurredPeriod>     <start value="2017-06-06"/>   </occurredPeriod>   <recorded value="2016-06-09T08:12:14+10:00"/>   <activity>     <coding>       <system value="http://terminology.hl7.org/CodeSystem/v3-DataOperation"/>       <code value="CREATE"/>       <display value="create"/>     </coding>     <text value="antiviral resistance detection"/>   </activity>   <agent>     <type>       <coding>         <system value="http://terminology.hl7.org/CodeSystem/v3-ParticipationType"/>         <code value="AUT"/>       </coding>     </type>     <who>       <reference value="Practitioner/example"/>     </who>   </agent>   <entity>     <role value="source"/>     <what>       <identifier>           <!--      <reference value="https://hive.biochemistry.gwu.edu/cgi-bin/prd/htscsrs/servlet.cgi?page

        id=bcoexample_1"/>  todo: this is not legal; fix once definition is fixed   -->
        <type>           <coding>             <system value="https://hive.biochemistry.gwu.edu"/>             <code value="biocompute"/>             <display value="obj.1001"/>           </coding>         </type>         <value value="https://hive.biochemistry.gwu.edu/cgi-bin/prd/htscsrs/servlet.cgi?pageid=bcoexample_1"/>       </identifier>     </what>   </entity> 


</

Provenance

>

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.