Release 4 4B

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Sequence-graphic-example-4.xml

Clinical Genomics Work Group Maturity Level : N/A Standards Status : Informative Compartments : Patient

Raw XML ( canonical form + also see XML Format Specification )

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MolecularSequence Graphic example-4 (id = "graphic-example-4") 

<?xml version="1.0" encoding="UTF-8"?>

<MolecularSequence xmlns="http://hl7.org/fhir">
    <id value="graphic-example-4"/> 
    (Details : {http://terminology.hl7.org/CodeSystem/chromosome-human code '2' = 'chromosome
               2', given as 'chromosome 2'})

    <text> <status value="generated"/> <div xmlns="http://www.w3.org/1999/xhtml"><p> <b> Generated Narrative</b> </p> <div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px
       solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource &quot;graphic-example-4&quot; </p> </div> <p> <b> type</b> : dna</p> <p> <b> coordinateSystem</b> : 0</p> <h3> ReferenceSeqs</h3> <table class="grid"><tr> <td> -</td> <td> <b> Chromosome</b> </td> <td> <b> GenomeBuild</b> </td> <td> <b> Strand</b> </td> <td> <b> WindowStart</b> </td> <td> <b> WindowEnd</b> </td> </tr> <tr> <td> *</td> <td> chromosome 2 <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="codesystem-chromosome-human.html">chromosome-human</a> #2)</span> </td> <td> GRCh 38</td> <td> watson</td> <td> 128273736</td> <td> 128273740</td> </tr> </table> </div> </text> <type value="dna"/> 

    <coordinateSystem value="0"/> 
    <referenceSeq> 
        <chromosome> 
            <coding> 
                <system value="http://terminology.hl7.org/CodeSystem/chromosome-human"/> 
                <code value="2"/> 
                <display value="chromosome 2"/> 
            </coding> 
        </chromosome> 
        <genomeBuild value="GRCh 38"/>     
        <strand value="watson"/> 
        <windowStart value="128273736"/> 
        <windowEnd value="128273740"/> 
    </referenceSeq> 


</

MolecularSequence

>

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.