This
page
is
part
of
the
FHIR
Specification
(v0.0.82:
(v1.0.2:
DSTU
1).
2).
The
current
version
which
supercedes
this
version
is
5.0.0
.
For
a
full
list
of
available
versions,
see
the
Directory
of
published
versions
.
Page
versions:
R5
R4B
R4
R3
R2
Formal
definitions
Detailed
Descriptions
for
the
elements
in
the
Specimen
resource.
| Specimen | |
| Definition |
A sample to be used for analysis. |
| Control | 1..1 |
| Specimen.identifier | |
| Definition |
Id for specimen. |
| Note | This is a business identifer, not a resource identifier (see discussion ) |
| Control | 0..* |
| Type | Identifier |
| Summary | true |
|
|
|
| Definition |
The
availability
of
|
| Control | 0..1 |
| Binding |
|
| Type |
|
|
|
|
|
|
|
|
|
|
| Definition |
The kind of material that forms the specimen. |
| Control |
|
| Binding |
|
| Type |
|
| Summary | true |
| Comments | The type can change the way that a specimen is handled, and drives what kind of analyses can properly be performed on the specimen. It is frequently used in diagnostic work flow decision making systems. |
|
|
|
| Definition |
Reference
to
the
parent
(source)
specimen
|
| Control | 0..* |
| Type |
|
| Comments | The parent specimen could be the source from which the current specimen is derived by some processing step (e.g. an aliquot or isolate or extracted nucleic acids from clinical samples) or one of many specimens that were combined to create a pooled sample. |
| Specimen.subject | |
| Definition |
Where the specimen came from. This may be from the patient(s) or from the environment or a device. |
| Control | 1..1 |
| Type |
|
| Requirements |
Must know the subject context. |
| Summary | true |
| Specimen.accessionIdentifier | |
| Definition |
The identifier assigned by the lab when accessioning specimen(s). This is not necessarily the same as the specimen identifier, depending on local lab procedures. |
| Control | 0..1 |
| Type | Identifier |
| Summary | true |
| Specimen.receivedTime | |
| Definition |
Time when specimen was received for processing or testing. |
| Control | 0..1 |
| Type | dateTime |
| Summary | true |
| Specimen.collection | |
| Definition |
Details concerning the specimen collection. |
| Control |
|
| Specimen.collection.collector | |
| Definition |
Person who collected the specimen. |
| Control | 0..1 |
| Type |
|
| Summary | true |
| Specimen.collection.comment | |
| Definition |
To communicate any details or issues encountered during the specimen collection procedure. |
| Control | 0..* |
| Type | string |
| Specimen.collection.collected[x] | |
| Definition |
Time when specimen was collected from subject - the physiologically relevant time. |
| Control | 0..1 |
| Type | dateTime | Period |
| [x] Note | See Choice of Data Types for further information about how to use [x] |
| Summary | true |
| Specimen.collection.quantity | |
| Definition |
The quantity of specimen collected; for instance the volume of a blood sample, or the physical measurement of an anatomic pathology sample. |
| Control | 0..1 |
| Type |
|
| Specimen.collection.method | |
| Definition |
A coded value specifying the technique that is used to perform the procedure. |
| Control | 0..1 |
| Binding |
SpecimenCollectionMethod:
|
| Type | CodeableConcept |
|
|
|
| Definition |
Anatomical
location
from
which
the
specimen
|
| Control | 0..1 |
| Binding |
|
| Type | CodeableConcept |
|
|
If the use case requires BodySite to be handled as a separate resource instead of an inline coded element (e.g. to identify and track separately) then use the standard extension body-site-instance . |
| Specimen.treatment | |
| Definition |
Details concerning treatment and processing steps for the specimen. |
| Control | 0..* |
| Specimen.treatment.description | |
| Definition |
Textual description of procedure. |
| Control | 0..1 |
| Type | string |
| Specimen.treatment.procedure | |
| Definition |
A coded value specifying the procedure used to process the specimen. |
| Control | 0..1 |
| Binding |
SpecimenTreatmentProcedure:
|
| Type | CodeableConcept |
| Specimen.treatment.additive | |
| Definition |
Material used in the processing step. |
| Control | 0..* |
| Type |
|
| Specimen.container | |
| Definition |
The container holding the specimen. The recursive nature of containers; i.e. blood in tube in tray in rack is not addressed here. |
| Control | 0..* |
| Specimen.container.identifier | |
| Definition |
Id for container. There may be multiple; a manufacturer's bar code, lab assigned identifier, etc. The container ID may differ from the specimen id in some circumstances. |
| Note | This is a business identifer, not a resource identifier (see discussion ) |
| Control | 0..* |
| Type | Identifier |
| Summary | true |
| Specimen.container.description | |
| Definition |
Textual description of the container. |
| Control | 0..1 |
| Type | string |
| Specimen.container.type | |
| Definition |
The
type
of
container
associated
with
the
specimen
(e.g.
slide,
aliquot,
|
| Control | 0..1 |
| Binding |
|
| Type | CodeableConcept |
| Specimen.container.capacity | |
| Definition |
The capacity (volume or other measure) the container may contain. |
| Control | 0..1 |
| Type |
|
| Specimen.container.specimenQuantity | |
| Definition |
The quantity of specimen in the container; may be volume, dimensions, or other appropriate measurements, depending on the specimen type. |
| Control | 0..1 |
| Type |
|
|
|
|
| Definition |
Introduced
substance
to
preserve,
maintain
or
enhance
the
|
| Control | 0..1 |
| Binding | v2 Additive/Preservative: Substance added to specimen container ( Example ) |
| Type |
|
| [x] Note | See Choice of Data Types for further information about how to use [x] |