DSTU2

This page is part of the FHIR Specification (v0.0.82: (v1.0.2: DSTU 1). 2). The current version which supercedes this version is 5.0.0 . For a full list of available versions, see the Directory of published versions

Extension Extension: HGVSproteinChange - Definition

URL for this extension: 


http://hl7.org/fhir/StructureDefinition/geneticsAminoAcidChange

Status: draft. Extension maintained by: Health Level Seven, Intl - Clinical Genomics Seven International (Clinical Genomics)

Protein variant following HGVS nomenclature and identifiers to internal and external systems if known. on the given ProteinReferenceSequenceId.

Context of Use: Use on element: Observation

usage info: insert a list of places where this extension is used

Extension Content

Summary

Name Flags Card. Type Description & Constraints doco
.. extension 0..1 string URL = http://hl7.org/fhir/StructureDefinition/geneticsAminoAcidChange
HGVSproteinChange: Protein variant following HGVS nomenclature on the given ProteinReferenceSequenceId.
Use on element: Observation

doco Documentation for this format

Fulle Structure

identifies the meaning of the extension Fixed Value:
Name Flags Card. Type Description & Constraints doco
. . extension 0..1 Extension URL = http://hl7.org/fhir/StructureDefinition/geneticsAminoAcidChange
HGVSproteinChange: Protein variant following HGVS nomenclature and identifiers to internal and external systems if known. on the given ProteinReferenceSequenceId.
Use on element: Observation
. . . extension 0..* Extension 0 .. 0 Additional Content defined by implementations
. . . url 1..1 uri http://hl7.org/fhir/StructureDefinition/geneticsAminoAcidChange "http://hl7.org/fhir/StructureDefinition/geneticsAminoAcidChange"
. . valueCode . valueString 0..1 1..1 code string Value of extension

doco Documentation for this format

XML Template 

<!-- HGVSproteinChange -->doco

< xmlns="http://hl7.org/fhir"

<extension xmlns="http://hl7.org/fhir"

     url="http://hl7.org/fhir/StructureDefinition/geneticsAminoAcidChange" >
  <!-- from Element: extension -->
 <

 <valueString value="[string]"/><!-- 1..1 Value of extension -->

</extension>

JSON Template 

{ // HGVSproteinChange
  // from Element: extension
    "url" : "http://hl7.org/fhir/StructureDefinition/geneticsAminoAcidChange", // R! 
    "

    "valueString" : "<string>" // R! Value of extension

  }

Summary

Name Flags Card. Type Description & Constraints doco
.. extension 0..1 string URL = http://hl7.org/fhir/StructureDefinition/geneticsAminoAcidChange
HGVSproteinChange: Protein variant following HGVS nomenclature on the given ProteinReferenceSequenceId.
Use on element: Observation

doco Documentation for this format

Full Structure

identifies the meaning of the extension Fixed Value:
Name Flags Card. Type Description & Constraints doco
. . extension 0..1 Extension URL = http://hl7.org/fhir/StructureDefinition/geneticsAminoAcidChange
HGVSproteinChange: Protein variant following HGVS nomenclature and identifiers to internal and external systems if known. on the given ProteinReferenceSequenceId.
Use on element: Observation
. . . extension 0..* Extension 0 .. 0 Additional Content defined by implementations
. . . url 1..1 uri http://hl7.org/fhir/StructureDefinition/geneticsAminoAcidChange "http://hl7.org/fhir/StructureDefinition/geneticsAminoAcidChange"
. . valueCode . valueString 0..1 1..1 code string Value of extension

doco Documentation for this format

XML Template 

<!-- HGVSproteinChange -->doco

< xmlns="http://hl7.org/fhir"

<extension xmlns="http://hl7.org/fhir"

     url="http://hl7.org/fhir/StructureDefinition/geneticsAminoAcidChange" >
  <!-- from Element: extension -->
 <

 <valueString value="[string]"/><!-- 1..1 Value of extension -->

</extension>

JSON Template

to do 
{ // HGVSproteinChange
  // from Element: extension
    "url" : "http://hl7.org/fhir/StructureDefinition/geneticsAminoAcidChange", // R! 
    "valueString" : "<string>" // R! Value of extension
  }