Release 5 R6 Ballot (2nd Draft)

This page is part of the FHIR Specification (v5.0.0: R5 - STU v6.0.0-ballot2: Release 6 Ballot (2nd Draft) (see Ballot Notes ). This is the The current published version in it's permanent home (it will always be available at this URL). is 5.0.0 . For a full list of available versions, see the Directory of published versions

Example GenomicStudy/SimpleVariantAnalysis-called (XML)

Clinical Genomics Work Group Maturity Level : N/A Standards Status : Informative Compartments : Patient

Raw XML ( canonical form + also see XML Format Specification )

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DocumentReference - Simple Variant Analysis - Called (id = "SimpleVariantAnalysis-called") 

<?xml version="1.0" encoding="UTF-8"?>


  
  

<DocumentReference xmlns="http://hl7.org/fhir">
  <id value="SimpleVariantAnalysis-called"/> 
  <text> 
    <status value="generated"/> <div xmlns="http://www.w3.org/1999/xhtml"><p> <b> Generated Narrative</b> </p> <div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border:
       1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource &quot;SimpleVariantAnalysis_called&quot; </p> </div> <p> <b> identifier</b> : id: 11118</p> <p> <b> status</b> : current</p> <p> <b> docStatus</b> : preliminary</p> <p> <b> description</b> : A sample Document Reference instance representing a BED file that may be used
         as input or output of a genomic analysis pipeline.
  
  
    
    
  
  
  

         as input or output of a genomic analysis pipeline.</p> <p> <b> securityLabel</b> : Restricted <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/3.1.0/CodeSystem-v3-Confidentiality.html">Confidentiality</a> #R)</span> </p> <blockquote> <p> <b> content</b> </p> </blockquote> </div> 
  </text>   <identifier>     <system value="http://www.somesystemabc.net/identifiers/files"/>     <value value="11118"/>   </identifier>   <status value="current"/>   <docStatus value="preliminary"/> 
  <description value="SimpleVariantAnalysis_called: A sample Document Reference instance representing
   a BED file that may be used as input or output of a genomic analysis pipeline.
  
    
      
      
      
    
  
  
    

   a BED file that may be used as input or output of a genomic analysis pipeline."/> 
  <securityLabel>     <coding>       <system value="http://terminology.hl7.org/CodeSystem/v3-Confidentiality"/>       <code value="R"/>       <display value="Restricted"/>     </coding>   </securityLabel>   <content>     <attachment> 
      <url value="https://chat.fhir.org/user_uploads/10155/jQZWWKs4JO8ZfhfrbsCbbMUA/SimpleVariantAnalysis_calle
      d.bed
      
      
    
  

      d.bed"/> 
      <!--   This line may need to be changed later   -->      <title value="SimpleVariantAnalysis_called"/>       <creation value="2019-03-01T01:02:01+01:00"/>     </attachment>   </content> 


</

DocumentReference

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Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.