Release 4B Snapshot 3: Connectathon 32 Base

This page is part of the FHIR Specification (v4.3.0: R4B - STU (v5.0.0-snapshot3: R5 Snapshot #3, to support Connectathon 32 ). The current version which supercedes this version is 5.0.0 . For a full list of available versions, see the Directory of published versions . Page versions: R5 R4B R4

10.9 10.10 Resource BodyStructure - Content

Orders and Observations icon Work Group Maturity Level : 1   Trial Use Security Category : Patient Compartments : Patient

Record details about an anatomical structure. This resource may be used when a coded concept does not provide the necessary detail needed for the use case.

10.9.1 10.10.1 Scope and Usage

The BodyStructure resource contains details about the anatomical location of a specimen or body part, including patient information, identifiers, as well as text descriptions and images. It

When needed, it allows the the representation of complex body structures and/or locations using the included and excluded elements. Also, it provides for the addition of qualifiers such as laterality and directionality to the anatomic location for those use cases where precoordination pre-coordination of codes is not possible. The BodyStructure resource supports recording and tracking of an anatomic location or structure on a patient outside the context of another resource. For example it can be the target of a Procedure resource or Observation resource.

10.9.2 10.10.2 Boundaries and Relationships

The BodyStructure resource is not intended to substitute for precoordination of codes. If precoordination of codes is supported by an implementation the codeableConcept should be used. This resource is not intended for describing the type of anatomical location but rather a specific body site on a specific patient.

10.9.3 10.10.3 References to this Resource

No resources refer to this resource directly.

10.9.4 10.10.4 Resource Content

Structure

Name icon Flags icon Card. icon Type icon Description & Constraints icon doco icon
. . BodyStructure TU DomainResource Specific and identified anatomical structure

Elements defined in Ancestors: id , meta , implicitRules , language , text , contained , extension , modifierExtension
. . . identifier Σ 0..* Identifier Bodystructure identifier

. . . active ?! Σ 0..1 boolean Whether this record is in active use
. . . morphology Σ 0..1 CodeableConcept Kind of Structure
SNOMED CT Morphologic Abnormalities ( Example )
.... structure Σ 1..1 CodeableConcept Code that represents the included structure
SNOMED CT Body Structures ( Example )
.... laterality 0..1 CodeableConcept Body site Code that represents the included structure laterality
Bodystructure Location Qualifier ( Example )
.... qualifier 0..* CodeableConcept Code that represents the included structure qualifier
Bodystructure Location Qualifier ( Example )

... excludedStructure 0..* BackboneElement Excluded anatomic locations(s)

.... structure Σ 1..1 CodeableConcept Code that represents the excluded structure
SNOMED CT Body Structures ( Example )
. . . locationQualifier . laterality 0..1 CodeableConcept Code that represents the excluded structure laterality
Bodystructure Location Qualifier ( Example )
.... qualifier 0..* CodeableConcept Body site modifier Code that represents the excluded structure qualifier
Bodystructure Location Qualifier ( Example )

. . . description Σ 0..1 string Text description
. . . image 0..* Attachment Attached images

. . . patient Σ 1..1 Reference ( Patient ) Who this is about

doco Documentation for this format icon

See the Extensions for this resource

UML Diagram ( Legend )

BodyStructure ( DomainResource ) Identifier for this instance of the anatomical structure identifier : Identifier [0..*] Whether this body site is in active use (this element modifies the meaning of other elements) active : boolean [0..1] The kind of structure being represented by the body structure at `BodyStructure.location`. This can define both normal and abnormal morphologies morphology : CodeableConcept [0..1] « null (Strength=Example) SNOMEDCTMorphologicAbnormalit... ?? » The anatomical location A summary, characterization or region explanation of the specimen, lesion, or body structure description : string [0..1] Image or images used to identify a location image : Attachment [0..*] The person to which the body site belongs patient : Reference [1..1] « Patient » IncludedStructure Code that represents the included structure structure : CodeableConcept [0..1] [1..1] « null (Strength=Example) SNOMEDCTBodyStructures ?? » Qualifier to refine Code that represents the anatomical location. These include qualifiers for laterality, relative location, directionality, number, and plane included structure laterality locationQualifier laterality : CodeableConcept [0..*] [0..1] « null (Strength=Example) BodystructureLocationQualifier ?? » Code that represents the included structure qualifier qualifier : CodeableConcept [0..*] « null (Strength=Example) BodystructureLocationQualifier ?? » ExcludedStructure A summary, characterization or explanation of Code that represents the body excluded structure description structure : string CodeableConcept [0..1] [1..1] « null (Strength=Example) SNOMEDCTBodyStructures ?? » Image or images used to identify a location Code that represents the excluded structure laterality image laterality : Attachment CodeableConcept [0..*] [0..1] « null (Strength=Example) BodystructureLocationQualifier ?? » The person to which Code that represents the body site belongs excluded structure qualifier patient qualifier : Reference CodeableConcept [1..1] [0..*] « Patient null (Strength=Example) BodystructureLocationQualifier ?? » The anatomical location(s) or region(s) of the specimen, lesion, or body structure includedStructure [1..*] The anatomical location(s) or region(s) not occupied or represented by the specimen, lesion, or body structure excludedStructure [0..*]

XML Template 

<BodyStructure xmlns="http://hl7.org/fhir"> doco
 <!-- from Resource: id, meta, implicitRules, and language -->
 <!-- from DomainResource: text, contained, extension, and modifierExtension -->
 <identifier><!-- 0..* Identifier Bodystructure identifier --></identifier>
 <active value="[boolean]"/><!-- 0..1 Whether this record is in active use -->
 <morphology><!-- 0..1 CodeableConcept Kind of Structure --></morphology>
 <</location>
 <</locationQualifier>

 <includedStructure>  <!-- 1..* Included anatomic location(s) -->
  <structure><!-- 1..1 CodeableConcept Code that represents the included structure --></structure>
  <laterality><!-- 0..1 CodeableConcept Code that represents the included structure laterality --></laterality>
  <qualifier><!-- 0..* CodeableConcept Code that represents the included structure qualifier --></qualifier>
 </includedStructure>
 <excludedStructure>  <!-- 0..* Excluded anatomic locations(s) -->
  <structure><!-- 1..1 CodeableConcept Code that represents the excluded structure --></structure>
  <laterality><!-- 0..1 CodeableConcept Code that represents the excluded structure laterality --></laterality>
  <qualifier><!-- 0..* CodeableConcept Code that represents the excluded structure qualifier --></qualifier>
 </excludedStructure>

 <description value="[string]"/><!-- 0..1 Text description -->
 <image><!-- 0..* Attachment Attached images --></image>
 <patient><!-- 1..1 Reference(Patient) Who this is about --></patient>
</BodyStructure>

Turtle Template 

@prefix fhir: <http://hl7.org/fhir/> .doco


[ a fhir:BodyStructure;
  fhir:nodeRole fhir:treeRoot; # if this is the parser root

  # from Resource: .id, .meta, .implicitRules, and .language
  # from DomainResource: .text, .contained, .extension, and .modifierExtension
  fhir:BodyStructure.identifier [ Identifier ], ... ; # 0..* Bodystructure identifier
  fhir:BodyStructure.active [ boolean ]; # 0..1 Whether this record is in active use
  fhir:BodyStructure.morphology [ CodeableConcept ]; # 0..1 Kind of Structure
  fhir:
  fhir:

  fhir:BodyStructure.includedStructure [ # 1..* Included anatomic location(s)
    fhir:BodyStructure.includedStructure.structure [ CodeableConcept ]; # 1..1 Code that represents the included structure
    fhir:BodyStructure.includedStructure.laterality [ CodeableConcept ]; # 0..1 Code that represents the included structure laterality
    fhir:BodyStructure.includedStructure.qualifier [ CodeableConcept ], ... ; # 0..* Code that represents the included structure qualifier
  ], ...;
  fhir:BodyStructure.excludedStructure [ # 0..* Excluded anatomic locations(s)
    fhir:BodyStructure.excludedStructure.structure [ CodeableConcept ]; # 1..1 Code that represents the excluded structure
    fhir:BodyStructure.excludedStructure.laterality [ CodeableConcept ]; # 0..1 Code that represents the excluded structure laterality
    fhir:BodyStructure.excludedStructure.qualifier [ CodeableConcept ], ... ; # 0..* Code that represents the excluded structure qualifier
  ], ...;

  fhir:BodyStructure.description [ string ]; # 0..1 Text description
  fhir:BodyStructure.image [ Attachment ], ... ; # 0..* Attached images
  fhir:BodyStructure.patient [ Reference(Patient) ]; # 1..1 Who this is about
]

Changes since R4

BodyStructure
BodyStructure.includedStructure
  • No Changes Added Mandatory Element
BodyStructure.includedStructure.structure
  • Added Mandatory Element
BodyStructure.includedStructure.laterality
  • Added Element
BodyStructure.includedStructure.qualifier
  • Added Element
BodyStructure.excludedStructure
  • Added Element
BodyStructure.excludedStructure.structure
  • Added Mandatory Element
BodyStructure.excludedStructure.laterality
  • Added Element
BodyStructure.excludedStructure.qualifier
  • Added Element
BodyStructure.location
  • deleted
BodyStructure.locationQualifier
  • deleted

See the Full Difference for further information

This analysis is available as XML or JSON .

Conversions between R3 and R4

Structure

Name icon Flags icon Card. icon Type icon Description & Constraints icon doco icon
. . BodyStructure TU DomainResource Specific and identified anatomical structure

Elements defined in Ancestors: id , meta , implicitRules , language , text , contained , extension , modifierExtension
. . . identifier Σ 0..* Identifier Bodystructure identifier

. . . active ?! Σ 0..1 boolean Whether this record is in active use
. . . morphology Σ 0..1 CodeableConcept Kind of Structure
SNOMED CT Morphologic Abnormalities ( Example )
.... structure Σ 1..1 CodeableConcept Code that represents the included structure
SNOMED CT Body Structures ( Example )
.... laterality 0..1 CodeableConcept Body site Code that represents the included structure laterality
Bodystructure Location Qualifier ( Example )
.... qualifier 0..* CodeableConcept Code that represents the included structure qualifier
Bodystructure Location Qualifier ( Example )

... excludedStructure 0..* BackboneElement Excluded anatomic locations(s)

.... structure Σ 1..1 CodeableConcept Code that represents the excluded structure
SNOMED CT Body Structures ( Example )
. . . locationQualifier . laterality 0..1 CodeableConcept Code that represents the excluded structure laterality
Bodystructure Location Qualifier ( Example )
.... qualifier 0..* CodeableConcept Body site modifier Code that represents the excluded structure qualifier
Bodystructure Location Qualifier ( Example )

. . . description Σ 0..1 string Text description
. . . image 0..* Attachment Attached images

. . . patient Σ 1..1 Reference ( Patient ) Who this is about

doco Documentation for this format icon

See the Extensions for this resource

UML Diagram ( Legend )

BodyStructure ( DomainResource ) Identifier for this instance of the anatomical structure identifier : Identifier [0..*] Whether this body site is in active use (this element modifies the meaning of other elements) active : boolean [0..1] The kind of structure being represented by the body structure at `BodyStructure.location`. This can define both normal and abnormal morphologies morphology : CodeableConcept [0..1] « null (Strength=Example) SNOMEDCTMorphologicAbnormalit... ?? » The anatomical location A summary, characterization or region explanation of the specimen, lesion, or body structure description : string [0..1] Image or images used to identify a location image : Attachment [0..*] The person to which the body site belongs patient : Reference [1..1] « Patient » IncludedStructure Code that represents the included structure structure : CodeableConcept [0..1] [1..1] « null (Strength=Example) SNOMEDCTBodyStructures ?? » Qualifier to refine Code that represents the anatomical location. These include qualifiers for laterality, relative location, directionality, number, and plane included structure laterality locationQualifier laterality : CodeableConcept [0..*] [0..1] « null (Strength=Example) BodystructureLocationQualifier ?? » Code that represents the included structure qualifier qualifier : CodeableConcept [0..*] « null (Strength=Example) BodystructureLocationQualifier ?? » ExcludedStructure A summary, characterization or explanation of Code that represents the body excluded structure description structure : string CodeableConcept [0..1] [1..1] « null (Strength=Example) SNOMEDCTBodyStructures ?? » Image or images used to identify a location Code that represents the excluded structure laterality image laterality : Attachment CodeableConcept [0..*] [0..1] « null (Strength=Example) BodystructureLocationQualifier ?? » The person to which Code that represents the body site belongs excluded structure qualifier patient qualifier : Reference CodeableConcept [1..1] [0..*] « Patient null (Strength=Example) BodystructureLocationQualifier ?? » The anatomical location(s) or region(s) of the specimen, lesion, or body structure includedStructure [1..*] The anatomical location(s) or region(s) not occupied or represented by the specimen, lesion, or body structure excludedStructure [0..*]

XML Template 

<BodyStructure xmlns="http://hl7.org/fhir"> doco
 <!-- from Resource: id, meta, implicitRules, and language -->
 <!-- from DomainResource: text, contained, extension, and modifierExtension -->
 <identifier><!-- 0..* Identifier Bodystructure identifier --></identifier>
 <active value="[boolean]"/><!-- 0..1 Whether this record is in active use -->
 <morphology><!-- 0..1 CodeableConcept Kind of Structure --></morphology>
 <</location>
 <</locationQualifier>

 <includedStructure>  <!-- 1..* Included anatomic location(s) -->
  <structure><!-- 1..1 CodeableConcept Code that represents the included structure --></structure>
  <laterality><!-- 0..1 CodeableConcept Code that represents the included structure laterality --></laterality>
  <qualifier><!-- 0..* CodeableConcept Code that represents the included structure qualifier --></qualifier>
 </includedStructure>
 <excludedStructure>  <!-- 0..* Excluded anatomic locations(s) -->
  <structure><!-- 1..1 CodeableConcept Code that represents the excluded structure --></structure>
  <laterality><!-- 0..1 CodeableConcept Code that represents the excluded structure laterality --></laterality>
  <qualifier><!-- 0..* CodeableConcept Code that represents the excluded structure qualifier --></qualifier>
 </excludedStructure>

 <description value="[string]"/><!-- 0..1 Text description -->
 <image><!-- 0..* Attachment Attached images --></image>
 <patient><!-- 1..1 Reference(Patient) Who this is about --></patient>
</BodyStructure>

Turtle Template 

@prefix fhir: <http://hl7.org/fhir/> .doco


[ a fhir:BodyStructure;
  fhir:nodeRole fhir:treeRoot; # if this is the parser root

  # from Resource: .id, .meta, .implicitRules, and .language
  # from DomainResource: .text, .contained, .extension, and .modifierExtension
  fhir:BodyStructure.identifier [ Identifier ], ... ; # 0..* Bodystructure identifier
  fhir:BodyStructure.active [ boolean ]; # 0..1 Whether this record is in active use
  fhir:BodyStructure.morphology [ CodeableConcept ]; # 0..1 Kind of Structure
  fhir:
  fhir:

  fhir:BodyStructure.includedStructure [ # 1..* Included anatomic location(s)
    fhir:BodyStructure.includedStructure.structure [ CodeableConcept ]; # 1..1 Code that represents the included structure
    fhir:BodyStructure.includedStructure.laterality [ CodeableConcept ]; # 0..1 Code that represents the included structure laterality
    fhir:BodyStructure.includedStructure.qualifier [ CodeableConcept ], ... ; # 0..* Code that represents the included structure qualifier
  ], ...;
  fhir:BodyStructure.excludedStructure [ # 0..* Excluded anatomic locations(s)
    fhir:BodyStructure.excludedStructure.structure [ CodeableConcept ]; # 1..1 Code that represents the excluded structure
    fhir:BodyStructure.excludedStructure.laterality [ CodeableConcept ]; # 0..1 Code that represents the excluded structure laterality
    fhir:BodyStructure.excludedStructure.qualifier [ CodeableConcept ], ... ; # 0..* Code that represents the excluded structure qualifier
  ], ...;

  fhir:BodyStructure.description [ string ]; # 0..1 Text description
  fhir:BodyStructure.image [ Attachment ], ... ; # 0..* Attached images
  fhir:BodyStructure.patient [ Reference(Patient) ]; # 1..1 Who this is about
]

Changes since Release 4

BodyStructure
BodyStructure.includedStructure
  • No Changes Added Mandatory Element
BodyStructure.includedStructure.structure
  • Added Mandatory Element
BodyStructure.includedStructure.laterality
  • Added Element
BodyStructure.includedStructure.qualifier
  • Added Element
BodyStructure.excludedStructure
  • Added Element
BodyStructure.excludedStructure.structure
  • Added Mandatory Element
BodyStructure.excludedStructure.laterality
  • Added Element
BodyStructure.excludedStructure.qualifier
  • Added Element
BodyStructure.location
  • deleted
BodyStructure.locationQualifier
  • deleted

See the Full Difference for further information

This analysis is available as XML or JSON .

Conversions between R3 and R4

 

See the Profiles & Extensions and the alternate Additional definitions: Master Definition XML + JSON , XML Schema / Schematron + JSON Schema , ShEx (for Turtle ) + see the extensions , the spreadsheet version & the dependency analysis

10.9.4.1 10.10.4.1 Terminology Bindings

Path Definition Type Reference
BodyStructure.morphology

This value set includes all codes from SNOMED CT icon where concept is-a 442083009 (Anatomical or acquired body site (body structure)).

Example SNOMEDCTMorphologicAbnormalities
BodyStructure.location BodyStructure.includedStructure.structure

This value set includes all codes from SNOMED CT icon where concept is-a 442083009 (Anatomical or acquired body site (body structure)).

Example SNOMEDCTBodyStructures
BodyStructure.locationQualifier BodyStructure.includedStructure.laterality

SNOMED-CT concepts modifying the anatomic location

Example BodystructureLocationQualifier
BodyStructure.includedStructure.qualifier

SNOMED-CT concepts modifying the anatomic location

Example BodystructureLocationQualifier
BodyStructure.excludedStructure.structure

This value set includes all codes from SNOMED CT icon where concept is-a 442083009 (Anatomical or acquired body site (body structure)).

Example SNOMEDCTBodyStructures
BodyStructure.excludedStructure.laterality

SNOMED-CT concepts modifying the anatomic location

Example BodystructureLocationQualifier
BodyStructure.excludedStructure.qualifier

SNOMED-CT concepts modifying the anatomic location

Example BodystructureLocationQualifier

10.9.5 10.10.5 Search Parameters

Search parameters for this resource. The common parameters also apply. See Searching for more information about searching in REST, messaging, and services.

Name Type Description Expression In Common
excluded_structure token Body site excludedStructure structure BodyStructure.excludedStructure.structure
identifier token Bodystructure identifier BodyStructure.identifier
location included_structure token Body site includedStructure structure BodyStructure.location BodyStructure.includedStructure.structure
morphology token Kind of Structure BodyStructure.morphology
patient reference Who this is about BodyStructure.patient
( Patient )