This
page
is
part
of
the
FHIR
Specification
(v4.3.0:
R4B
(v5.0.0-draft-final:
Final
QA
Preview
for
R5
-
STU
see
ballot
notes
).
The
current
version
which
supercedes
this
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is
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.
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list
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see
the
Directory
of
published
versions
.
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versions:
R5
R4B
10.1.14.1
Scope
Defines
constraints
and
Usage
The
DeviceMetricObservation
profile
describes
extensions
on
the
direct
or
derived,
qualitative
or
quantitative
physiological
measurement,
setting,
or
calculation
data
produced
by
a
medical
device
or
a
device
component.
Observation
resource
for
use
in
querying
and
retrieving
the
vital
sign
blood
pressure.
This
profile
describes
the
direct
or
derived,
qualitative
or
quantitative
physiological
measurement,
setting,
or
calculation
data
produced
by
a
medical
device
or
a
device
component.
Observation-genetics
Describes
how
the
observation
resource
is
used
to
report
structured
genetic
test
results
observation-vitalsigns
FHIR
Vital
Signs
Profile
observation-bodyweight
FHIR
Body
Weight
Profile
observation-vitalspanel
FHIR
Vital
Signs
Panel
Profile
observation-bodyheight
FHIR
Body
Height
Profile
observation-resprate
FHIR
Respiratory
Rate
Profile
observation-heartrate
FHIR
Heart
Rate
Profile
observation-bodytemp
FHIR
Body
Temperature
Profile
observation-headcircum
FHIR
Head
Circumference
Profile
observation-oxygensat
FHIR
Oxygen
Saturation
Profile
observation-bmi
FHIR
Body
Mass
Index
(BMI)
Profile
observation-bp
FHIR
Blood
Pressure
Profile
Extensions
:
observation-bodyPosition
bodyPosition
:
The
position
of
the
body
when
the
observation
was
done,
e.g.
standing,
sitting.
To
be
used
only
when
the
body
position
in
not
precoordinated
in
the
observation
code.
observation-delta
delta
:
The
qualitative
change
in
the
value
relative
to
the
previous
measurement.
Usually
only
recorded
if
the
change
is
clinically
significant.
observation-focusCode
focusCode
:
A
code
representing
the
focus
of
an
observation
when
the
focus
is
not
the
patient
of
record.
In
other
words,
the
focus
of
the
observation
is
different
from
Observation.subject
.
An
example
use
case
would
be
using
the
Observation
resource
to
capture
whether
the
mother
is
trained
to
change
her
child's
tracheostomy
tube.
In
this
example,
the
child
is
the
patient
of
record
and
the
mother
is
focal
subject
referenced
using
this
extension.
Other
example
focal
subjects
include
spouses,
related
persons,
feti,
or
donors.
observation-timeOffset
timeOffset
:
A
specific
offset
time
in
milliseconds
from
the
stated
time
in
the
Observation.appliesDateTime
to
allow
for
representation
of
sequential
recording
of
sampled
data
from
the
same
lead
or
data
stream.
For
example,
an
ECG
recorder
may
record
sequentially
3
leads
four
time
to
receive
12-lead
ECG,
see
ISO
22077
.
observation-sequelTo
sequelTo
:
This
observation
follows
the
target
observation
(e.g.
timed
tests
such
as
Glucose
Tolerance
Test).
observation-replaces
replaces
:
This
observation
replaces
a
previous
observation
(i.e.
a
revised
value).
observation-gatewayDevice
gatewayDevice
:
The
Provenance/AuditEvent
resources
can
represent
the
same
information.
Note
that
the
Provenance/AuditEvent
resources
can
represent
the
same
information.
observation-specimenCode
specimenCode
:
A
code
representing
the
the
type
of
specimen
used
for
this
observation.
Should
only
be
used
if
not
implicit
in
the
code
found
in
Observation.code
.
observation-deviceCode
deviceCode
:
A
code
representing
the
the
type
of
device
used
for
this
observation.
Should
only
be
used
if
not
implicit
in
the
code
found
in
Observation.code
.
observation-precondition
precondition
:
Other
preceding
or
concurrent
observations
that
must
be
known
to
correctly
interpret
the
the
observation.
For
example
an
fiO2
measure
taken
alongside
of
a
SpO2
measurement.
See
the
Observation
notes
section
for
additional
guidance.
observation-reagent
reagent
:
Reference
to
reagents
used
to
generate
this
observation.
This
is
intended
for
this
for
in-lab
transactions
between
instruments
and
Laboratory
Information
Systems
(LIS).
observation-secondaryFinding
secondaryFinding
:
Secondary
findings
are
genetic
test
results
that
provide
information
about
variants
in
a
gene
unrelated
to
the
primary
purpose
for
the
testing,
most
often
discovered
when
Whole
Exome
Sequencing
(WES)
or
Whole
Genome
Sequencing
(WGS)
is
performed.
This
extension
should
be
used
to
denote
when
a
genetic
finding
is
being
shared
as
a
secondary
finding,
and
ideally
refer
to
a
corresponding
guideline
or
policy
statement.
For
more
detail,
please
see:
https://ghr.nlm.nih.gov/primer/testing/secondaryfindings.
observation-geneticsGene
Gene
:
The
material
on
this
page
will
be
removed
in
a
future
release.
This
content
is
deprecated
and
SHOULD
NOT
be
used.
Implementers
are
instead
directed
to
the
(
Genomics
Reporting
Implementation
Guide
)
for
guidance.
A
region
(or
regions)
that
includes
all
of
the
sequence
elements
necessary
to
encode
a
functional
transcript.
A
gene
may
include
regulatory
regions,
transcribed
regions
and/or
other
functional
sequence
regions
(
SO:0000704
).
This
element
is
the
official
gene
symbol
approved
by
the
HGNC,
which
is
a
short
abbreviated
form
of
the
gene
name
(
HGNC
).
LOINC
Code:
(
48018-6
).
observation-geneticsDNARegionName
DNARegionName
:
The
material
on
this
page
will
be
removed
in
a
future
release.
This
content
is
deprecated
and
SHOULD
NOT
be
used.
Implementers
are
instead
directed
to
the
(
Genomics
Reporting
Implementation
Guide
)
for
guidance.
A
region
(or
regions)
that
includes
all
of
the
sequence
elements
necessary
to
encode
a
functional
transcript.
A
gene
may
include
regulatory
regions,
transcribed
regions
and/or
other
functional
sequence
regions
(
SO:0000704
).
This
element
is
the
official
gene
symbol
approved
by
the
HGNC,
which
is
a
short
abbreviated
form
of
the
gene
name
(
HGNC
).
LOINC
Code:
(
48018-6
).
observation-geneticsCopyNumberEvent
CopyNumberEvent
:
The
material
on
this
page
will
be
removed
in
a
future
release.
This
content
is
deprecated
and
SHOULD
NOT
be
used.
Implementers
are
instead
directed
to
the
(
Genomics
Reporting
Implementation
Guide
)
for
guidance.
A
variation
that
increases
or
decreases
the
copy
number
of
a
given
region
(
SO:0001019
).
Values:
amplification/deletion/LOH.
observation-geneticsGenomicSourceClass
GenomicSourceClass
:
The
material
on
this
page
will
be
removed
in
a
future
release.
This
content
is
deprecated
and
SHOULD
NOT
be
used.
Implementers
are
instead
directed
to
the
(
Genomics
Reporting
Implementation
Guide
)
for
guidance.
Source
of
sample
used
to
determine
the
sequence
in
sequencing
lab
--
germline,
somatic,
prenatal.
LOINC
Code:
(
48002-0
).
observation-geneticsInterpretation
Interpretation
:
The
material
on
this
page
will
be
removed
in
a
future
release.
This
content
is
deprecated
and
SHOULD
NOT
be
used.
Implementers
are
instead
directed
to
the
(
Genomics
Reporting
Implementation
Guide
)
for
guidance.
Clinical
Interpretations
for
variant.
It's
a
reference
to
an
Observation
resource.
observation-geneticsVariant
Variant
:
Variant
information.
observation-geneticsAminoAcidChange
AminoAcidChange
:
AminoAcidChange
information.
observation-geneticsAllele
Allele
:
Allele
information.
observation-geneticsAncestry
Ancestry
:
Ancestry
information.
observation-geneticsPhaseSet
PhaseSet
:
Phase
set
information.
Examples
:
Genetics
1
Genetics
example
1
Genetics
2
Genetics
example
2
Genetics
3
Genetics
example
3
Genetics
4
Genetics
example
4
Genetics
5
Genetics
example
5
Diplotype(with
Haplotypes
Ref)
Example
of
diplotype
data
(with
haplotypes
observation
as
reference)
Haplotype
Example
of
haplotype
data
that
is
basis
of
a
diplotype
data
Haplotype-2
Example
of
another
haplotype
data
that
is
basis
of
a
diplotype
data
Phenotype
Example
of
phenotype
data
TPMT-diplotype
Example
of
a
TPMT
diplotype
that
link
to
two
TPMT
haplotype
observations
TPMT-haplotype-one
Example
of
a
TPMT
haplotype
observation
TPMT-haplotype-two
Example
of
another
TPMT
haplotype
observation
Breast
Cancer
genetic
test
Example
of
breast
cancer
genetic
observation
10.1.14.3
Search
Parameters
Search
parameters
defined
by
this
package.
See
Searching
for
more
information
about
searching
in
REST,
messaging,
and
services.
Name
Type
Description
Paths
Source
amino-acid-change
string
HGVS
Protein
Change
XML
/
JSON
dna-variant
string
HGVS
DNA
variant
XML
/
JSON
gene-amino-acid-change
string
HGNC
gene
symbol
and
HGVS
Protein
change
XML
/
JSON
gene-dnavariant
string
HGNC
gene
symbol
and
HGVS
DNA
Variant
XML
/
JSON
gene-identifier
token
HGNC
gene
symbol
and
identifier
XML
/
JSON
For
the
initial
scope,
this
DeviceMetricObservation
profile
is
only
applicable
to
describe
a
measurement
that
is
produced
by
any
medical
device
that
implements
or
derives
from
the
ISO/IEEE
11073
standard.