FHIR Release 3 (STU) R4 Ballot #2 (Mixed Normative/Trial use)

This page is part of the FHIR Specification (v3.0.2: STU 3). (v3.5.0: R4 Ballot #2). The current version which supercedes this version is 5.0.0 . For a full list of available versions, see the Directory of published versions . Page versions: R5 R4B R4 R3

Coord-1base-example

Clinical Genomics Work Group Maturity Level : N/A Ballot Status : Informative Compartments : Not linked to any defined compartments

This is the narrative for the resource. See also the XML or , JSON or Turtle format. This example conforms to the profile Sequence .

Generated Narrative with Details

id : coord-1-base

type : dna

coordinateSystem : 1

ReferenceSeqs

- ReferenceSeqString Strand WindowStart WindowEnd
* ACGTAGTC 1 watson 1 8

variant

start : 2

end : 3

observedAllele : ATG

referenceAllele : -

cigar : 3I

variant

start : 5

end : 5

observedAllele : T

referenceAllele : A

cigar : 3I

variant

start : 7

end : 7

observedAllele : -

referenceAllele : T

cigar : 1D

observedSeq : ACATGGTAGC

 

 

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.