R6 Ballot (3rd Draft) FHIR CI-Build

This page is part of the FHIR Specification v6.0.0-ballot3: Release 6 Ballot (3rd Draft) (see Ballot Notes ). The current version is 5.0.0 . For a full list Continuous Integration Build of available versions, see FHIR (will be incorrect/inconsistent at times).
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4.4.1.669 4.4.1.494 ValueSet http://hl7.org/fhir/ValueSet/genomicstudy-dataformat

Responsible Owner: Clinical Genomics icon Work Group   Maturity Level : 1 Trial Use Use Context : Country: World
Official URL : http://hl7.org/fhir/ValueSet/genomicstudy-dataformat Version : 6.0.0-ballot3
draft as of 2022-08-18 2022-08-17 Computable Name : GenomicStudyDataFormat
Flags : OID : 2.16.840.1.113883.4.642.3.3084

This value set is used in the following places:

4.4.1.669.1 4.4.1.494.1 Definition

The data formats relevant to Genomic Study analysis.

4.4.1.669.2 4.4.1.494.2 Content Logical Definition

Generated Narrative: ValueSet genomicstudy-dataformat

Last updated: 2025-04-01T12:16:37.966+11:00 Profile: Shareable ValueSet 2025-11-13T14:03:06.418+11:00

 

4.4.1.669.3 4.4.1.494.3 Expansion

This expansion generated 01 Apr 13 Nov 2025

ValueSet

Expansion performed internally based on codesystem Genomic Study Data Format v6.0.0-ballot3 (CodeSystem)

This value set contains 40 concepts

Code System System Code Display
http://hl7.org/fhir/genomicstudy-dataformat    bam http://hl7.org/fhir/genomicstudy-dataformat BAM
http://hl7.org/fhir/genomicstudy-dataformat    bed http://hl7.org/fhir/genomicstudy-dataformat BED
http://hl7.org/fhir/genomicstudy-dataformat    bedpe http://hl7.org/fhir/genomicstudy-dataformat BEDPE
http://hl7.org/fhir/genomicstudy-dataformat    bedgraph http://hl7.org/fhir/genomicstudy-dataformat BedGraph
http://hl7.org/fhir/genomicstudy-dataformat    bigbed http://hl7.org/fhir/genomicstudy-dataformat bigBed
http://hl7.org/fhir/genomicstudy-dataformat    bigWig http://hl7.org/fhir/genomicstudy-dataformat bigWig
http://hl7.org/fhir/genomicstudy-dataformat    birdsuite-files http://hl7.org/fhir/genomicstudy-dataformat Birdsuite-Files
http://hl7.org/fhir/genomicstudy-dataformat    broadpeak http://hl7.org/fhir/genomicstudy-dataformat broadPeak
http://hl7.org/fhir/genomicstudy-dataformat    cbs http://hl7.org/fhir/genomicstudy-dataformat CBS
http://hl7.org/fhir/genomicstudy-dataformat    chemical-reactivity-probing-profiles http://hl7.org/fhir/genomicstudy-dataformat Chemical-Reactivity-Probing-Profiles
http://hl7.org/fhir/genomicstudy-dataformat    chrom-sizes http://hl7.org/fhir/genomicstudy-dataformat chrom-sizes
http://hl7.org/fhir/genomicstudy-dataformat    cn http://hl7.org/fhir/genomicstudy-dataformat CN
http://hl7.org/fhir/genomicstudy-dataformat    custom-file-formats http://hl7.org/fhir/genomicstudy-dataformat Custom-File-Formats
http://hl7.org/fhir/genomicstudy-dataformat    cytoband http://hl7.org/fhir/genomicstudy-dataformat Cytoband
http://hl7.org/fhir/genomicstudy-dataformat    fasta http://hl7.org/fhir/genomicstudy-dataformat FASTA
http://hl7.org/fhir/genomicstudy-dataformat    gct http://hl7.org/fhir/genomicstudy-dataformat GCT
http://hl7.org/fhir/genomicstudy-dataformat    cram http://hl7.org/fhir/genomicstudy-dataformat CRAM
http://hl7.org/fhir/genomicstudy-dataformat    genepred http://hl7.org/fhir/genomicstudy-dataformat genePred
http://hl7.org/fhir/genomicstudy-dataformat    gff-gtf http://hl7.org/fhir/genomicstudy-dataformat GFF/GTF
http://hl7.org/fhir/genomicstudy-dataformat    gistic http://hl7.org/fhir/genomicstudy-dataformat GISTIC
http://hl7.org/fhir/genomicstudy-dataformat    goby http://hl7.org/fhir/genomicstudy-dataformat Goby
http://hl7.org/fhir/genomicstudy-dataformat    gwas http://hl7.org/fhir/genomicstudy-dataformat GWAS
http://hl7.org/fhir/genomicstudy-dataformat    igv http://hl7.org/fhir/genomicstudy-dataformat IGV
http://hl7.org/fhir/genomicstudy-dataformat    loh http://hl7.org/fhir/genomicstudy-dataformat LOH
http://hl7.org/fhir/genomicstudy-dataformat    maf-multiple-alignment-format http://hl7.org/fhir/genomicstudy-dataformat MAF-Multiple Alignment Format
http://hl7.org/fhir/genomicstudy-dataformat    maf-mutation-annotation-format http://hl7.org/fhir/genomicstudy-dataformat MAF-Mutation-Annotation-Format
http://hl7.org/fhir/genomicstudy-dataformat    merged-bam-file http://hl7.org/fhir/genomicstudy-dataformat Merged BAM File
http://hl7.org/fhir/genomicstudy-dataformat    mut http://hl7.org/fhir/genomicstudy-dataformat MUT
http://hl7.org/fhir/genomicstudy-dataformat    narrowpeak http://hl7.org/fhir/genomicstudy-dataformat narrowPeak
http://hl7.org/fhir/genomicstudy-dataformat    psl http://hl7.org/fhir/genomicstudy-dataformat PSL
http://hl7.org/fhir/genomicstudy-dataformat    res http://hl7.org/fhir/genomicstudy-dataformat RES
http://hl7.org/fhir/genomicstudy-dataformat    rna-secondary-structure-formats http://hl7.org/fhir/genomicstudy-dataformat RNA-Secondary-Structure-Formats
http://hl7.org/fhir/genomicstudy-dataformat    sam http://hl7.org/fhir/genomicstudy-dataformat SAM
http://hl7.org/fhir/genomicstudy-dataformat    sample-info-attributes-file http://hl7.org/fhir/genomicstudy-dataformat Sample-Info-Attributes-file
http://hl7.org/fhir/genomicstudy-dataformat    seg http://hl7.org/fhir/genomicstudy-dataformat SEG
http://hl7.org/fhir/genomicstudy-dataformat    tdf http://hl7.org/fhir/genomicstudy-dataformat TDF
http://hl7.org/fhir/genomicstudy-dataformat    track-line http://hl7.org/fhir/genomicstudy-dataformat Track Line
http://hl7.org/fhir/genomicstudy-dataformat    type-line http://hl7.org/fhir/genomicstudy-dataformat Type Line
http://hl7.org/fhir/genomicstudy-dataformat    vcf http://hl7.org/fhir/genomicstudy-dataformat VCF
http://hl7.org/fhir/genomicstudy-dataformat    wig http://hl7.org/fhir/genomicstudy-dataformat WIG

 

See the full registry of value sets defined as part of FHIR.

Explanation of the columns that may appear on this page:

Lvl A few code lists that FHIR defines are hierarchical - each code is assigned a level. For value sets, levels are mostly used to organize codes for user convenience, but may follow code system hierarchy - see Code System for further information
Source The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance). If the code is in italics, this indicates that the code is not selectable ('Abstract')
Display The display (used in the display element of a Coding ). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code