Cross-Version Extension for Sequence.quality in R3

Context of Use

This extension may be used in the following contexts:

• element MolecularSequence (For version R5)
• extension http://hl7.org/fhir/5.0/StructureDefinition/extension-MolecularSequence
• element Basic (For version R2)

Name	Flags	Card.	Type	Description & Constraints
Extension		0..*	Extension	An set of value as quality of sequence
extension:endR3			?gen-e1? [CanonicalType[http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.end]]	URL: http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.end
extension:fScoreR3			?gen-e1? [CanonicalType[http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.fScore]]	URL: http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.fScore
extension:gtFPR3			?gen-e1? [CanonicalType[http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.gtFP]]	URL: http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.gtFP
extension:methodR3			?gen-e1? [CanonicalType[http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.method]]	URL: http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.method
extension:precisionR3			?gen-e1? [CanonicalType[http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.precision]]	URL: http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.precision
extension:queryFPR3			?gen-e1? [CanonicalType[http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.queryFP]]	URL: http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.queryFP
extension:queryTPR3			?gen-e1? [CanonicalType[http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.queryTP]]	URL: http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.queryTP
extension:recallR3			?gen-e1? [CanonicalType[http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.recall]]	URL: http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.recall
extension:scoreR3			?gen-e1? [CanonicalType[http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.score]]	URL: http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.score
extension:standardSequenceR3			?gen-e1? [CanonicalType[http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.standardSequence]]	URL: http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.standardSequence
extension:startR3			?gen-e1? [CanonicalType[http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.start]]	URL: http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.start
extension:truthFNR3			?gen-e1? [CanonicalType[http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.truthFN]]	URL: http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.truthFN
extension:truthTPR3			?gen-e1? [CanonicalType[http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.truthTP]]	URL: http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.truthTP
extension:typeR3			?gen-e1? [CanonicalType[http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.type]]	URL: http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.type
extension:rocR4			?gen-e1? [CanonicalType[http://hl7.org/fhir/4.0/StructureDefinition/extension-MolecularSequence.quality.roc]]	URL: http://hl7.org/fhir/4.0/StructureDefinition/extension-MolecularSequence.quality.roc
extension		1..
value[x]		..0
url				"http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality"
Documentation for this format

{
  "resourceType" : "StructureDefinition",
  "id" : "xv-r3-seq.quality",
  "url" : "http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality",
  "name" : "XVerExtensionSequence.qualityR3",
  "title" : "Cross-Version Extension for Sequence.quality in R3",
  "status" : "active",
  "experimental" : false,
  "publisher" : "Health Level Seven International (Clinical Genomics)",
  "contact" : [{
    "telecom" : [{
      "system" : "url",
      "value" : "http://hl7.org/fhir"
    }]
  },
  {
    "telecom" : [{
      "system" : "url",
      "value" : "http://www.hl7.org/Special/committees/clingenomics/index.cfm"
    }]
  }],
  "description" : "Cross-Version Extension for Sequence.quality. Valid in versions R2, R5\r\n\r\nThis is a valid cross-version extension because it's counted as a new element",
  "jurisdiction" : [{
    "coding" : [{
      "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
      "code" : "001"
    }]
  }],
  "fhirVersion" : "5.0.0",
  "kind" : "complex-type",
  "abstract" : false,
  "context" : [{
    "extension" : [{
      "extension" : [{
        "url" : "startFhirVersion",
        "valueCode" : "5.0"
      },
      {
        "url" : "endFhirVersion",
        "valueCode" : "5.0"
      }],
      "url" : "http://hl7.org/fhir/StructureDefinition/version-specific-use"
    }],
    "type" : "element",
    "expression" : "MolecularSequence"
  },
  {
    "type" : "extension",
    "expression" : "http://hl7.org/fhir/5.0/StructureDefinition/extension-MolecularSequence"
  },
  {
    "extension" : [{
      "extension" : [{
        "url" : "startFhirVersion",
        "valueCode" : "1.0"
      },
      {
        "url" : "endFhirVersion",
        "valueCode" : "1.0"
      }],
      "url" : "http://hl7.org/fhir/StructureDefinition/version-specific-use"
    }],
    "type" : "element",
    "expression" : "Basic"
  }],
  "type" : "Extension",
  "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Extension",
  "derivation" : "constraint",
  "differential" : {
    "element" : [{
      "path" : "Extension",
      "short" : "An set of value as quality of sequence",
      "definition" : "An experimental feature attribute that defines the quality of the feature in a quantitative way, such as a phred quality score ([SO:0001686](http://www.sequenceontology.org/browser/current_svn/term/SO:0001686)).",
      "min" : 0,
      "max" : "*",
      "isModifier" : false
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "endR3",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.end"]
      }]
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "fScoreR3",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.fScore"]
      }]
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "gtFPR3",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.gtFP"]
      }]
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "methodR3",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.method"]
      }]
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "precisionR3",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.precision"]
      }]
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "queryFPR3",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.queryFP"]
      }]
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "queryTPR3",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.queryTP"]
      }]
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "recallR3",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.recall"]
      }]
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "scoreR3",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.score"]
      }]
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "standardSequenceR3",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.standardSequence"]
      }]
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "startR3",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.start"]
      }]
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "truthFNR3",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.truthFN"]
      }]
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "truthTPR3",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.truthTP"]
      }]
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "typeR3",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality.type"]
      }]
    },
    {
      "path" : "Extension.extension",
      "sliceName" : "rocR4",
      "type" : [{
        "code" : "Extension",
        "profile" : ["http://hl7.org/fhir/4.0/StructureDefinition/extension-MolecularSequence.quality.roc"]
      }]
    },
    {
      "path" : "Extension.extension",
      "min" : 1
    },
    {
      "path" : "Extension.value[x]",
      "max" : "0"
    },
    {
      "path" : "Extension.url",
      "fixedUri" : "http://hl7.org/fhir/3.0/StructureDefinition/extension-Sequence.quality"
    }]
  }
}